MA_20211008_ALL

library(dplyr)
library(knitr)
load("MA_20211008_ALL.RData")

Significant results

kable(sig.genes.df[,1:11], caption='Statistics of 118 significant genes')
Statistics of 118 significant genes
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
CNDP2 0.046 0.070 0.093 0.000 0.609 0.738 0.012 0 0.000 1.000 0.000
COMMD2 0.087 0.129 0.171 0.000 1.970 0.374 0.021 0 0.000 1.000 0.000
UBIAD1 0.038 0.058 0.078 0.000 1.029 0.794 0.010 0 0.000 1.000 0.000
PFKP -0.140 -0.100 -0.060 0.000 0.113 0.945 0.020 0 0.000 1.000 0.001
SHD -0.211 -0.151 -0.091 0.000 0.856 0.652 0.031 0 0.000 1.000 0.001
TMCC1 -0.122 -0.088 -0.054 0.000 2.366 0.500 0.017 0 0.000 1.000 0.001
KIAA0513 -0.117 -0.083 -0.049 0.000 2.608 0.456 0.017 0 0.000 1.000 0.002
LOC91561 0.024 0.042 0.059 0.000 0.573 0.751 0.009 0 0.000 1.000 0.002
NOMO1 -0.125 -0.089 -0.052 0.000 0.776 0.678 0.019 0 0.000 1.000 0.002
FH -0.079 -0.055 -0.031 0.000 2.520 0.472 0.012 0 0.000 1.000 0.004
LOC400566 -0.183 -0.128 -0.073 0.000 0.974 0.614 0.028 0 0.000 1.000 0.004
SLC29A1 -0.172 -0.120 -0.068 0.000 0.850 0.837 0.026 0 0.000 1.000 0.004
TMED1 0.033 0.057 0.082 0.000 0.861 0.650 0.012 0 0.000 1.000 0.004
FLJ13305 0.046 0.082 0.119 0.000 0.662 0.718 0.019 0 0.000 1.000 0.005
PEA15 0.027 0.048 0.069 0.000 0.209 0.976 0.011 0 0.000 1.000 0.005
SPARCL1 -0.049 -0.034 -0.019 0.000 2.405 0.493 0.008 0 0.000 1.000 0.005
TMEM25 -0.333 -0.231 -0.129 0.000 0.109 0.991 0.052 0 0.000 1.000 0.005
TSPAN14 0.045 0.081 0.117 0.000 1.355 0.716 0.018 0 0.000 1.000 0.005
ZFR 0.029 0.052 0.074 0.000 2.312 0.510 0.012 0 0.000 1.000 0.005
RPL23AP7 0.046 0.083 0.120 0.000 1.037 0.595 0.019 0 0.000 1.000 0.006
PIB5PA -0.151 -0.104 -0.057 0.000 0.345 0.841 0.024 0 0.000 1.000 0.007
TCEA3 0.078 0.143 0.208 0.000 0.932 0.818 0.033 0 0.000 1.000 0.008
DFFA 0.059 0.109 0.160 0.000 1.707 0.635 0.026 0 0.000 1.000 0.009
TSPAN33 0.045 0.084 0.122 0.000 1.968 0.579 0.020 0 0.000 1.000 0.009
BSCL2 -0.064 -0.043 -0.023 0.000 0.443 0.931 0.010 0 0.000 1.000 0.011
CIRH1A -0.095 -0.065 -0.034 0.000 1.259 0.533 0.015 0 0.000 1.000 0.011
CPLX1 -0.150 -0.102 -0.054 0.000 0.982 0.612 0.025 0 0.000 1.000 0.012
CTGF -0.300 -0.204 -0.108 0.000 0.460 0.795 0.049 0 0.000 1.000 0.012
ISOC2 0.038 0.073 0.108 0.000 0.617 0.735 0.018 0 0.000 1.000 0.013
PGBD1 -0.097 -0.066 -0.034 0.000 2.908 0.406 0.016 0 0.000 1.000 0.013
PHKG2 -0.084 -0.057 -0.030 0.000 2.833 0.418 0.014 0 0.000 1.000 0.013
RYBP 0.055 0.105 0.155 0.000 0.627 0.890 0.026 0 0.000 1.000 0.013
SERTAD4 -0.226 -0.153 -0.080 0.000 0.296 0.961 0.037 0 0.000 1.000 0.013
USP46 0.032 0.062 0.092 0.000 0.589 0.745 0.015 0 0.000 1.000 0.013
CENTG2 0.024 0.047 0.070 0.000 0.102 0.950 0.012 0 0.000 1.000 0.014
DENND2A 0.046 0.089 0.132 0.000 2.359 0.501 0.022 0 0.000 1.000 0.014
PELI3 -0.117 -0.079 -0.040 0.000 1.902 0.593 0.019 0 0.000 1.000 0.014
ZNF179 -0.106 -0.071 -0.037 0.000 0.266 0.875 0.018 0 0.000 1.000 0.014
ACTR1B -0.113 -0.076 -0.039 0.000 0.875 0.831 0.019 0 0.000 1.000 0.015
VHL 0.037 0.072 0.107 0.000 0.757 0.860 0.018 0 0.000 1.000 0.015
IQSEC1 -0.092 -0.062 -0.031 0.000 1.981 0.576 0.016 0 0.000 1.000 0.016
KLC2 -0.124 -0.083 -0.042 0.000 1.964 0.580 0.021 0 0.000 1.000 0.016
PRC1 -0.127 -0.085 -0.043 0.000 2.442 0.486 0.022 0 0.000 1.000 0.016
PUS7 -0.096 -0.064 -0.033 0.000 0.332 0.954 0.016 0 0.000 1.000 0.016
RNMT -0.073 -0.049 -0.025 0.000 0.599 0.741 0.012 0 0.000 1.000 0.016
COQ10A -0.085 -0.057 -0.029 0.000 0.898 0.638 0.014 0 0.000 1.000 0.017
MGC2747 0.023 0.046 0.069 0.000 1.252 0.535 0.012 0 0.000 1.000 0.017
C1orf171 0.068 0.137 0.206 0.000 0.166 0.920 0.035 0 0.000 1.000 0.018
C6orf136 -0.075 -0.050 -0.025 0.000 0.567 0.753 0.013 0 0.000 1.000 0.018
Kua 0.033 0.066 0.099 0.000 0.491 0.782 0.017 0 0.000 1.000 0.018
RPL31 0.028 0.057 0.086 0.000 0.591 0.899 0.015 0 0.000 1.000 0.018
SLA 0.041 0.082 0.123 0.000 0.614 0.893 0.021 0 0.000 1.000 0.018
ZNF271 0.026 0.052 0.078 0.000 0.811 0.666 0.013 0 0.000 1.000 0.018
AIFM1 -0.078 -0.052 -0.025 0.000 1.076 0.783 0.014 0 0.000 1.000 0.021
CNTNAP1 -0.110 -0.073 -0.036 0.000 0.065 0.968 0.019 0 0.000 1.000 0.021
NDEL1 -0.104 -0.069 -0.034 0.000 1.986 0.575 0.018 0 0.000 1.000 0.021
PTD004 -0.197 -0.130 -0.064 0.000 1.935 0.380 0.034 0 0.000 1.000 0.021
SLC20A1 -0.126 -0.083 -0.041 0.000 1.030 0.794 0.022 0 0.000 1.000 0.021
XRCC1 -0.089 -0.059 -0.029 0.000 0.452 0.929 0.015 0 0.000 1.000 0.021
CABP1 -0.166 -0.110 -0.053 0.000 0.287 0.962 0.029 0 0.000 1.000 0.022
CGI-115 0.032 0.067 0.101 0.000 0.241 0.887 0.018 0 0.000 1.000 0.022
HIST2H2BE 0.058 0.120 0.182 0.000 0.502 0.778 0.032 0 0.000 1.000 0.022
PHF16 0.036 0.074 0.112 0.000 0.292 0.864 0.019 0 0.000 1.000 0.022
PPME1 -0.096 -0.063 -0.030 0.000 1.020 0.796 0.017 0 0.000 1.000 0.024
SLC25A27 -0.180 -0.118 -0.057 0.000 1.252 0.741 0.031 0 0.000 1.000 0.024
AGPAT7 -0.150 -0.099 -0.047 0.000 0.330 0.848 0.026 0 0.000 1.000 0.025
IDH3A -0.106 -0.070 -0.033 0.000 0.902 0.825 0.019 0 0.000 1.000 0.025
IDH3G -0.086 -0.057 -0.027 0.000 1.429 0.699 0.015 0 0.000 1.000 0.025
NAG6 -0.104 -0.068 -0.033 0.000 1.431 0.489 0.018 0 0.000 1.000 0.025
OGDHL -0.113 -0.074 -0.035 0.000 0.247 0.884 0.020 0 0.000 1.000 0.025
SC5DL -0.107 -0.071 -0.034 0.000 1.262 0.532 0.019 0 0.000 1.000 0.025
SLC6A17 -0.133 -0.087 -0.041 0.000 1.660 0.646 0.023 0 0.000 1.000 0.026
C5orf21 0.019 0.040 0.061 0.000 0.610 0.737 0.011 0 0.000 1.000 0.028
CFDP1 0.027 0.058 0.089 0.000 0.527 0.913 0.016 0 0.000 1.000 0.028
DSCR1L1 -0.115 -0.075 -0.035 0.000 1.488 0.475 0.020 0 0.000 1.000 0.028
ZNF331 -0.090 -0.059 -0.027 0.000 3.219 0.359 0.016 0 6.792 1.073 0.028
NDUFB8 -0.041 -0.027 -0.012 0.000 1.765 0.623 0.007 0 0.000 1.000 0.030
PKNOX2 -0.092 -0.060 -0.028 0.000 1.465 0.690 0.016 0 0.000 1.000 0.030
PLXDC2 0.055 0.118 0.180 0.000 1.661 0.436 0.032 0 0.000 1.000 0.030
SCAMP5 -0.082 -0.053 -0.025 0.000 1.113 0.774 0.015 0 0.000 1.000 0.030
SLC25A29 0.041 0.089 0.136 0.000 1.234 0.539 0.024 0 0.000 1.000 0.030
C3orf39 -0.093 -0.061 -0.028 0.000 0.110 0.946 0.017 0 0.000 1.000 0.031
C5orf16 -0.220 -0.143 -0.066 0.000 1.505 0.471 0.039 0 0.000 1.000 0.031
CALR 0.031 0.068 0.104 0.000 1.006 0.800 0.019 0 0.000 1.000 0.031
FAM51A1 0.026 0.057 0.089 0.000 1.942 0.379 0.016 0 0.000 1.000 0.031
MGC33692 -0.079 -0.052 -0.024 0.000 0.059 0.971 0.014 0 0.000 1.000 0.031
NAP1L5 -0.176 -0.114 -0.053 0.000 1.199 0.753 0.031 0 0.000 1.000 0.031
DHDDS -0.092 -0.059 -0.027 0.000 1.654 0.647 0.016 0 0.000 1.000 0.032
FLJ22318 -0.097 -0.063 -0.029 0.000 2.651 0.266 0.017 0 24.566 1.326 0.032
GALE -0.077 -0.050 -0.023 0.000 1.647 0.649 0.014 0 0.000 1.000 0.032
HIST1H2BD 0.032 0.069 0.107 0.000 0.910 0.634 0.019 0 0.000 1.000 0.032
SENP2 -0.074 -0.048 -0.022 0.000 0.552 0.907 0.013 0 0.000 1.000 0.032
CPLX2 -0.207 -0.134 -0.061 0.000 0.509 0.917 0.037 0 0.000 1.000 0.033
CTBP1 -0.072 -0.047 -0.021 0.000 2.751 0.432 0.013 0 0.000 1.000 0.033
CYP2E1 -0.184 -0.119 -0.054 0.000 0.179 0.981 0.033 0 0.000 1.000 0.033
ENTPD6 -0.105 -0.068 -0.031 0.000 0.179 0.981 0.019 0 0.000 1.000 0.033
PSMD2 -0.060 -0.039 -0.018 0.000 0.849 0.838 0.011 0 0.000 1.000 0.033
WDR40A 0.029 0.065 0.101 0.000 0.649 0.723 0.018 0 0.000 1.000 0.034
CAMK2G -0.117 -0.076 -0.034 0.000 1.513 0.469 0.021 0 0.000 1.000 0.035
CCBL2 -0.228 -0.147 -0.066 0.000 1.418 0.492 0.041 0 0.000 1.000 0.035
PREX1 0.043 0.095 0.148 0.000 0.850 0.838 0.027 0 0.000 1.000 0.035
ANKRD32 0.061 0.136 0.212 0.000 0.350 0.840 0.039 0 0.000 1.000 0.039
SLC25A3 -0.051 -0.033 -0.015 0.000 0.357 0.949 0.009 0 0.000 1.000 0.039
C9orf45 -0.113 -0.072 -0.032 0.000 0.336 0.845 0.021 0 0.000 1.000 0.040
AHI1 -0.113 -0.073 -0.032 0.000 0.079 0.961 0.021 0 0.000 1.000 0.041
PNMA6A -0.104 -0.066 -0.029 0.000 2.525 0.471 0.019 0 0.000 1.000 0.041
CCT4 0.020 0.045 0.071 0.001 1.129 0.770 0.013 0 0.000 1.000 0.045
ETS2 -0.152 -0.097 -0.042 0.001 0.227 0.973 0.028 0 0.000 1.000 0.045
HEBP1 0.023 0.052 0.082 0.001 2.714 0.257 0.015 0 26.311 1.357 0.045
HIST1H2BK 0.045 0.104 0.163 0.001 1.103 0.576 0.030 0 0.000 1.000 0.045
NPAS3 0.040 0.093 0.145 0.001 1.353 0.508 0.027 0 0.000 1.000 0.045
PIGV 0.026 0.060 0.094 0.001 2.134 0.344 0.017 0 6.279 1.067 0.045
SOX4 0.037 0.085 0.134 0.001 0.207 0.976 0.025 0 0.000 1.000 0.045
TARBP1 -0.156 -0.100 -0.043 0.001 0.354 0.950 0.029 0 0.000 1.000 0.045
AARSD1 -0.066 -0.042 -0.018 0.001 1.440 0.487 0.012 0 0.000 1.000 0.046
GANAB 0.029 0.067 0.105 0.001 0.470 0.926 0.019 0 0.000 1.000 0.046
PSMF1 0.020 0.047 0.074 0.001 1.750 0.417 0.014 0 0.000 1.000 0.046
DPP8 -0.093 -0.059 -0.026 0.001 2.161 0.339 0.017 0 7.455 1.081 0.048

CNDP2

Statistics of CNDP2 meta-analisys

kable(sig.genes.df['CNDP2',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
CNDP2 0.046 0.07 0.093 0 0.609 0.738 0.012 0 0 1 0

Gene information

Forest plot

knitr::include_graphics("plots/CNDP2_FOREST.png")

Funnel plot

knitr::include_graphics("plots/CNDP2_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/CNDP2_INFLUENCE.png")

COMMD2

Statistics of COMMD2 meta-analisys

kable(sig.genes.df['COMMD2',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
COMMD2 0.087 0.129 0.171 0 1.97 0.374 0.021 0 0 1 0

Gene information

Forest plot

knitr::include_graphics("plots/COMMD2_FOREST.png")

Funnel plot

knitr::include_graphics("plots/COMMD2_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/COMMD2_INFLUENCE.png")

UBIAD1

Statistics of UBIAD1 meta-analisys

kable(sig.genes.df['UBIAD1',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
UBIAD1 0.038 0.058 0.078 0 1.029 0.794 0.01 0 0 1 0

Gene information

Forest plot

knitr::include_graphics("plots/UBIAD1_FOREST.png")

Funnel plot

knitr::include_graphics("plots/UBIAD1_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/UBIAD1_INFLUENCE.png")

PFKP

Statistics of PFKP meta-analisys

kable(sig.genes.df['PFKP',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
PFKP -0.14 -0.1 -0.06 0 0.113 0.945 0.02 0 0 1 0.001

Gene information

Forest plot

knitr::include_graphics("plots/PFKP_FOREST.png")

Funnel plot

knitr::include_graphics("plots/PFKP_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/PFKP_INFLUENCE.png")

SHD

Statistics of SHD meta-analisys

kable(sig.genes.df['SHD',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
SHD -0.211 -0.151 -0.091 0 0.856 0.652 0.031 0 0 1 0.001

Gene information

Forest plot

knitr::include_graphics("plots/SHD_FOREST.png")

Funnel plot

knitr::include_graphics("plots/SHD_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/SHD_INFLUENCE.png")

TMCC1

Statistics of TMCC1 meta-analisys

kable(sig.genes.df['TMCC1',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
TMCC1 -0.122 -0.088 -0.054 0 2.366 0.5 0.017 0 0 1 0.001

Gene information

Forest plot

knitr::include_graphics("plots/TMCC1_FOREST.png")

Funnel plot

knitr::include_graphics("plots/TMCC1_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/TMCC1_INFLUENCE.png")

KIAA0513

Statistics of KIAA0513 meta-analisys

kable(sig.genes.df['KIAA0513',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
KIAA0513 -0.117 -0.083 -0.049 0 2.608 0.456 0.017 0 0 1 0.002

Gene information

Forest plot

knitr::include_graphics("plots/KIAA0513_FOREST.png")

Funnel plot

knitr::include_graphics("plots/KIAA0513_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/KIAA0513_INFLUENCE.png")

LOC91561

Statistics of LOC91561 meta-analisys

kable(sig.genes.df['LOC91561',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
LOC91561 0.024 0.042 0.059 0 0.573 0.751 0.009 0 0 1 0.002

Gene information

Forest plot

knitr::include_graphics("plots/LOC91561_FOREST.png")

Funnel plot

knitr::include_graphics("plots/LOC91561_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/LOC91561_INFLUENCE.png")

NOMO1

Statistics of NOMO1 meta-analisys

kable(sig.genes.df['NOMO1',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
NOMO1 -0.125 -0.089 -0.052 0 0.776 0.678 0.019 0 0 1 0.002

Gene information

Forest plot

knitr::include_graphics("plots/NOMO1_FOREST.png")

Funnel plot

knitr::include_graphics("plots/NOMO1_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/NOMO1_INFLUENCE.png")

FH

Statistics of FH meta-analisys

kable(sig.genes.df['FH',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
FH -0.079 -0.055 -0.031 0 2.52 0.472 0.012 0 0 1 0.004

Gene information

Forest plot

knitr::include_graphics("plots/FH_FOREST.png")

Funnel plot

knitr::include_graphics("plots/FH_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/FH_INFLUENCE.png")

LOC400566

Statistics of LOC400566 meta-analisys

kable(sig.genes.df['LOC400566',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
LOC400566 -0.183 -0.128 -0.073 0 0.974 0.614 0.028 0 0 1 0.004

Gene information

Forest plot

knitr::include_graphics("plots/LOC400566_FOREST.png")

Funnel plot

knitr::include_graphics("plots/LOC400566_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/LOC400566_INFLUENCE.png")

SLC29A1

Statistics of SLC29A1 meta-analisys

kable(sig.genes.df['SLC29A1',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
SLC29A1 -0.172 -0.12 -0.068 0 0.85 0.837 0.026 0 0 1 0.004

Gene information

Forest plot

knitr::include_graphics("plots/SLC29A1_FOREST.png")

Funnel plot

knitr::include_graphics("plots/SLC29A1_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/SLC29A1_INFLUENCE.png")

TMED1

Statistics of TMED1 meta-analisys

kable(sig.genes.df['TMED1',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
TMED1 0.033 0.057 0.082 0 0.861 0.65 0.012 0 0 1 0.004

Gene information

Forest plot

knitr::include_graphics("plots/TMED1_FOREST.png")

Funnel plot

knitr::include_graphics("plots/TMED1_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/TMED1_INFLUENCE.png")

FLJ13305

Statistics of FLJ13305 meta-analisys

kable(sig.genes.df['FLJ13305',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
FLJ13305 0.046 0.082 0.119 0 0.662 0.718 0.019 0 0 1 0.005

Gene information

Forest plot

knitr::include_graphics("plots/FLJ13305_FOREST.png")

Funnel plot

knitr::include_graphics("plots/FLJ13305_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/FLJ13305_INFLUENCE.png")

PEA15

Statistics of PEA15 meta-analisys

kable(sig.genes.df['PEA15',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
PEA15 0.027 0.048 0.069 0 0.209 0.976 0.011 0 0 1 0.005

Gene information

Forest plot

knitr::include_graphics("plots/PEA15_FOREST.png")

Funnel plot

knitr::include_graphics("plots/PEA15_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/PEA15_INFLUENCE.png")

SPARCL1

Statistics of SPARCL1 meta-analisys

kable(sig.genes.df['SPARCL1',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
SPARCL1 -0.049 -0.034 -0.019 0 2.405 0.493 0.008 0 0 1 0.005

Gene information

Forest plot

knitr::include_graphics("plots/SPARCL1_FOREST.png")

Funnel plot

knitr::include_graphics("plots/SPARCL1_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/SPARCL1_INFLUENCE.png")

TMEM25

Statistics of TMEM25 meta-analisys

kable(sig.genes.df['TMEM25',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
TMEM25 -0.333 -0.231 -0.129 0 0.109 0.991 0.052 0 0 1 0.005

Gene information

Forest plot

knitr::include_graphics("plots/TMEM25_FOREST.png")

Funnel plot

knitr::include_graphics("plots/TMEM25_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/TMEM25_INFLUENCE.png")

TSPAN14

Statistics of TSPAN14 meta-analisys

kable(sig.genes.df['TSPAN14',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
TSPAN14 0.045 0.081 0.117 0 1.355 0.716 0.018 0 0 1 0.005

Gene information

Forest plot

knitr::include_graphics("plots/TSPAN14_FOREST.png")

Funnel plot

knitr::include_graphics("plots/TSPAN14_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/TSPAN14_INFLUENCE.png")

ZFR

Statistics of ZFR meta-analisys

kable(sig.genes.df['ZFR',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
ZFR 0.029 0.052 0.074 0 2.312 0.51 0.012 0 0 1 0.005

Gene information

Forest plot

knitr::include_graphics("plots/ZFR_FOREST.png")

Funnel plot

knitr::include_graphics("plots/ZFR_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/ZFR_INFLUENCE.png")

RPL23AP7

Statistics of RPL23AP7 meta-analisys

kable(sig.genes.df['RPL23AP7',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
RPL23AP7 0.046 0.083 0.12 0 1.037 0.595 0.019 0 0 1 0.006

Gene information

Forest plot

knitr::include_graphics("plots/RPL23AP7_FOREST.png")

Funnel plot

knitr::include_graphics("plots/RPL23AP7_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/RPL23AP7_INFLUENCE.png")

PIB5PA

Statistics of PIB5PA meta-analisys

kable(sig.genes.df['PIB5PA',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
PIB5PA -0.151 -0.104 -0.057 0 0.345 0.841 0.024 0 0 1 0.007

Gene information

Forest plot

knitr::include_graphics("plots/PIB5PA_FOREST.png")

Funnel plot

knitr::include_graphics("plots/PIB5PA_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/PIB5PA_INFLUENCE.png")

TCEA3

Statistics of TCEA3 meta-analisys

kable(sig.genes.df['TCEA3',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
TCEA3 0.078 0.143 0.208 0 0.932 0.818 0.033 0 0 1 0.008

Gene information

Forest plot

knitr::include_graphics("plots/TCEA3_FOREST.png")

Funnel plot

knitr::include_graphics("plots/TCEA3_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/TCEA3_INFLUENCE.png")

DFFA

Statistics of DFFA meta-analisys

kable(sig.genes.df['DFFA',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
DFFA 0.059 0.109 0.16 0 1.707 0.635 0.026 0 0 1 0.009

Gene information

Forest plot

knitr::include_graphics("plots/DFFA_FOREST.png")

Funnel plot

knitr::include_graphics("plots/DFFA_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/DFFA_INFLUENCE.png")

TSPAN33

Statistics of TSPAN33 meta-analisys

kable(sig.genes.df['TSPAN33',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
TSPAN33 0.045 0.084 0.122 0 1.968 0.579 0.02 0 0 1 0.009

Gene information

Forest plot

knitr::include_graphics("plots/TSPAN33_FOREST.png")

Funnel plot

knitr::include_graphics("plots/TSPAN33_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/TSPAN33_INFLUENCE.png")

BSCL2

Statistics of BSCL2 meta-analisys

kable(sig.genes.df['BSCL2',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
BSCL2 -0.064 -0.043 -0.023 0 0.443 0.931 0.01 0 0 1 0.011

Gene information

Forest plot

knitr::include_graphics("plots/BSCL2_FOREST.png")

Funnel plot

knitr::include_graphics("plots/BSCL2_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/BSCL2_INFLUENCE.png")

CIRH1A

Statistics of CIRH1A meta-analisys

kable(sig.genes.df['CIRH1A',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
CIRH1A -0.095 -0.065 -0.034 0 1.259 0.533 0.015 0 0 1 0.011

Gene information

Forest plot

knitr::include_graphics("plots/CIRH1A_FOREST.png")

Funnel plot

knitr::include_graphics("plots/CIRH1A_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/CIRH1A_INFLUENCE.png")

CPLX1

Statistics of CPLX1 meta-analisys

kable(sig.genes.df['CPLX1',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
CPLX1 -0.15 -0.102 -0.054 0 0.982 0.612 0.025 0 0 1 0.012

Gene information

Forest plot

knitr::include_graphics("plots/CPLX1_FOREST.png")

Funnel plot

knitr::include_graphics("plots/CPLX1_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/CPLX1_INFLUENCE.png")

CTGF

Statistics of CTGF meta-analisys

kable(sig.genes.df['CTGF',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
CTGF -0.3 -0.204 -0.108 0 0.46 0.795 0.049 0 0 1 0.012

Gene information

Forest plot

knitr::include_graphics("plots/CTGF_FOREST.png")

Funnel plot

knitr::include_graphics("plots/CTGF_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/CTGF_INFLUENCE.png")

ISOC2

Statistics of ISOC2 meta-analisys

kable(sig.genes.df['ISOC2',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
ISOC2 0.038 0.073 0.108 0 0.617 0.735 0.018 0 0 1 0.013

Gene information

Forest plot

knitr::include_graphics("plots/ISOC2_FOREST.png")

Funnel plot

knitr::include_graphics("plots/ISOC2_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/ISOC2_INFLUENCE.png")

PGBD1

Statistics of PGBD1 meta-analisys

kable(sig.genes.df['PGBD1',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
PGBD1 -0.097 -0.066 -0.034 0 2.908 0.406 0.016 0 0 1 0.013

Gene information

Forest plot

knitr::include_graphics("plots/PGBD1_FOREST.png")

Funnel plot

knitr::include_graphics("plots/PGBD1_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/PGBD1_INFLUENCE.png")

PHKG2

Statistics of PHKG2 meta-analisys

kable(sig.genes.df['PHKG2',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
PHKG2 -0.084 -0.057 -0.03 0 2.833 0.418 0.014 0 0 1 0.013

Gene information

Forest plot

knitr::include_graphics("plots/PHKG2_FOREST.png")

Funnel plot

knitr::include_graphics("plots/PHKG2_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/PHKG2_INFLUENCE.png")

RYBP

Statistics of RYBP meta-analisys

kable(sig.genes.df['RYBP',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
RYBP 0.055 0.105 0.155 0 0.627 0.89 0.026 0 0 1 0.013

Gene information

Forest plot

knitr::include_graphics("plots/RYBP_FOREST.png")

Funnel plot

knitr::include_graphics("plots/RYBP_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/RYBP_INFLUENCE.png")

SERTAD4

Statistics of SERTAD4 meta-analisys

kable(sig.genes.df['SERTAD4',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
SERTAD4 -0.226 -0.153 -0.08 0 0.296 0.961 0.037 0 0 1 0.013

Gene information

Forest plot

knitr::include_graphics("plots/SERTAD4_FOREST.png")

Funnel plot

knitr::include_graphics("plots/SERTAD4_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/SERTAD4_INFLUENCE.png")

USP46

Statistics of USP46 meta-analisys

kable(sig.genes.df['USP46',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
USP46 0.032 0.062 0.092 0 0.589 0.745 0.015 0 0 1 0.013

Gene information

Forest plot

knitr::include_graphics("plots/USP46_FOREST.png")

Funnel plot

knitr::include_graphics("plots/USP46_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/USP46_INFLUENCE.png")

CENTG2

Statistics of CENTG2 meta-analisys

kable(sig.genes.df['CENTG2',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
CENTG2 0.024 0.047 0.07 0 0.102 0.95 0.012 0 0 1 0.014

Gene information

Forest plot

knitr::include_graphics("plots/CENTG2_FOREST.png")

Funnel plot

knitr::include_graphics("plots/CENTG2_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/CENTG2_INFLUENCE.png")

DENND2A

Statistics of DENND2A meta-analisys

kable(sig.genes.df['DENND2A',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
DENND2A 0.046 0.089 0.132 0 2.359 0.501 0.022 0 0 1 0.014

Gene information

Forest plot

knitr::include_graphics("plots/DENND2A_FOREST.png")

Funnel plot

knitr::include_graphics("plots/DENND2A_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/DENND2A_INFLUENCE.png")

PELI3

Statistics of PELI3 meta-analisys

kable(sig.genes.df['PELI3',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
PELI3 -0.117 -0.079 -0.04 0 1.902 0.593 0.019 0 0 1 0.014

Gene information

Forest plot

knitr::include_graphics("plots/PELI3_FOREST.png")

Funnel plot

knitr::include_graphics("plots/PELI3_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/PELI3_INFLUENCE.png")

ZNF179

Statistics of ZNF179 meta-analisys

kable(sig.genes.df['ZNF179',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
ZNF179 -0.106 -0.071 -0.037 0 0.266 0.875 0.018 0 0 1 0.014

Gene information

Forest plot

knitr::include_graphics("plots/ZNF179_FOREST.png")

Funnel plot

knitr::include_graphics("plots/ZNF179_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/ZNF179_INFLUENCE.png")

ACTR1B

Statistics of ACTR1B meta-analisys

kable(sig.genes.df['ACTR1B',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
ACTR1B -0.113 -0.076 -0.039 0 0.875 0.831 0.019 0 0 1 0.015

Gene information

Forest plot

knitr::include_graphics("plots/ACTR1B_FOREST.png")

Funnel plot

knitr::include_graphics("plots/ACTR1B_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/ACTR1B_INFLUENCE.png")

VHL

Statistics of VHL meta-analisys

kable(sig.genes.df['VHL',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
VHL 0.037 0.072 0.107 0 0.757 0.86 0.018 0 0 1 0.015

Gene information

Forest plot

knitr::include_graphics("plots/VHL_FOREST.png")

Funnel plot

knitr::include_graphics("plots/VHL_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/VHL_INFLUENCE.png")

IQSEC1

Statistics of IQSEC1 meta-analisys

kable(sig.genes.df['IQSEC1',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
IQSEC1 -0.092 -0.062 -0.031 0 1.981 0.576 0.016 0 0 1 0.016

Gene information

Forest plot

knitr::include_graphics("plots/IQSEC1_FOREST.png")

Funnel plot

knitr::include_graphics("plots/IQSEC1_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/IQSEC1_INFLUENCE.png")

KLC2

Statistics of KLC2 meta-analisys

kable(sig.genes.df['KLC2',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
KLC2 -0.124 -0.083 -0.042 0 1.964 0.58 0.021 0 0 1 0.016

Gene information

Forest plot

knitr::include_graphics("plots/KLC2_FOREST.png")

Funnel plot

knitr::include_graphics("plots/KLC2_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/KLC2_INFLUENCE.png")

PRC1

Statistics of PRC1 meta-analisys

kable(sig.genes.df['PRC1',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
PRC1 -0.127 -0.085 -0.043 0 2.442 0.486 0.022 0 0 1 0.016

Gene information

Forest plot

knitr::include_graphics("plots/PRC1_FOREST.png")

Funnel plot

knitr::include_graphics("plots/PRC1_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/PRC1_INFLUENCE.png")

PUS7

Statistics of PUS7 meta-analisys

kable(sig.genes.df['PUS7',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
PUS7 -0.096 -0.064 -0.033 0 0.332 0.954 0.016 0 0 1 0.016

Gene information

Forest plot

knitr::include_graphics("plots/PUS7_FOREST.png")

Funnel plot

knitr::include_graphics("plots/PUS7_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/PUS7_INFLUENCE.png")

RNMT

Statistics of RNMT meta-analisys

kable(sig.genes.df['RNMT',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
RNMT -0.073 -0.049 -0.025 0 0.599 0.741 0.012 0 0 1 0.016

Gene information

Forest plot

knitr::include_graphics("plots/RNMT_FOREST.png")

Funnel plot

knitr::include_graphics("plots/RNMT_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/RNMT_INFLUENCE.png")

COQ10A

Statistics of COQ10A meta-analisys

kable(sig.genes.df['COQ10A',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
COQ10A -0.085 -0.057 -0.029 0 0.898 0.638 0.014 0 0 1 0.017

Gene information

Forest plot

knitr::include_graphics("plots/COQ10A_FOREST.png")

Funnel plot

knitr::include_graphics("plots/COQ10A_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/COQ10A_INFLUENCE.png")

MGC2747

Statistics of MGC2747 meta-analisys

kable(sig.genes.df['MGC2747',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
MGC2747 0.023 0.046 0.069 0 1.252 0.535 0.012 0 0 1 0.017

Gene information

Forest plot

knitr::include_graphics("plots/MGC2747_FOREST.png")

Funnel plot

knitr::include_graphics("plots/MGC2747_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/MGC2747_INFLUENCE.png")

C1orf171

Statistics of C1orf171 meta-analisys

kable(sig.genes.df['C1orf171',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
C1orf171 0.068 0.137 0.206 0 0.166 0.92 0.035 0 0 1 0.018

Gene information

Forest plot

knitr::include_graphics("plots/C1orf171_FOREST.png")

Funnel plot

knitr::include_graphics("plots/C1orf171_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/C1orf171_INFLUENCE.png")

C6orf136

Statistics of C6orf136 meta-analisys

kable(sig.genes.df['C6orf136',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
C6orf136 -0.075 -0.05 -0.025 0 0.567 0.753 0.013 0 0 1 0.018

Gene information

Forest plot

knitr::include_graphics("plots/C6orf136_FOREST.png")

Funnel plot

knitr::include_graphics("plots/C6orf136_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/C6orf136_INFLUENCE.png")

Kua

Statistics of Kua meta-analisys

kable(sig.genes.df['Kua',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
Kua 0.033 0.066 0.099 0 0.491 0.782 0.017 0 0 1 0.018

Gene information

Forest plot

knitr::include_graphics("plots/Kua_FOREST.png")

Funnel plot

knitr::include_graphics("plots/Kua_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/Kua_INFLUENCE.png")

RPL31

Statistics of RPL31 meta-analisys

kable(sig.genes.df['RPL31',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
RPL31 0.028 0.057 0.086 0 0.591 0.899 0.015 0 0 1 0.018

Gene information

Forest plot

knitr::include_graphics("plots/RPL31_FOREST.png")

Funnel plot

knitr::include_graphics("plots/RPL31_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/RPL31_INFLUENCE.png")

SLA

Statistics of SLA meta-analisys

kable(sig.genes.df['SLA',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
SLA 0.041 0.082 0.123 0 0.614 0.893 0.021 0 0 1 0.018

Gene information

Forest plot

knitr::include_graphics("plots/SLA_FOREST.png")

Funnel plot

knitr::include_graphics("plots/SLA_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/SLA_INFLUENCE.png")

ZNF271

Statistics of ZNF271 meta-analisys

kable(sig.genes.df['ZNF271',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
ZNF271 0.026 0.052 0.078 0 0.811 0.666 0.013 0 0 1 0.018

Gene information

Forest plot

knitr::include_graphics("plots/ZNF271_FOREST.png")

Funnel plot

knitr::include_graphics("plots/ZNF271_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/ZNF271_INFLUENCE.png")

AIFM1

Statistics of AIFM1 meta-analisys

kable(sig.genes.df['AIFM1',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
AIFM1 -0.078 -0.052 -0.025 0 1.076 0.783 0.014 0 0 1 0.021

Gene information

Forest plot

knitr::include_graphics("plots/AIFM1_FOREST.png")

Funnel plot

knitr::include_graphics("plots/AIFM1_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/AIFM1_INFLUENCE.png")

CNTNAP1

Statistics of CNTNAP1 meta-analisys

kable(sig.genes.df['CNTNAP1',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
CNTNAP1 -0.11 -0.073 -0.036 0 0.065 0.968 0.019 0 0 1 0.021

Gene information

Forest plot

knitr::include_graphics("plots/CNTNAP1_FOREST.png")

Funnel plot

knitr::include_graphics("plots/CNTNAP1_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/CNTNAP1_INFLUENCE.png")

NDEL1

Statistics of NDEL1 meta-analisys

kable(sig.genes.df['NDEL1',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
NDEL1 -0.104 -0.069 -0.034 0 1.986 0.575 0.018 0 0 1 0.021

Gene information

Forest plot

knitr::include_graphics("plots/NDEL1_FOREST.png")

Funnel plot

knitr::include_graphics("plots/NDEL1_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/NDEL1_INFLUENCE.png")

PTD004

Statistics of PTD004 meta-analisys

kable(sig.genes.df['PTD004',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
PTD004 -0.197 -0.13 -0.064 0 1.935 0.38 0.034 0 0 1 0.021

Gene information

Forest plot

knitr::include_graphics("plots/PTD004_FOREST.png")

Funnel plot

knitr::include_graphics("plots/PTD004_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/PTD004_INFLUENCE.png")

SLC20A1

Statistics of SLC20A1 meta-analisys

kable(sig.genes.df['SLC20A1',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
SLC20A1 -0.126 -0.083 -0.041 0 1.03 0.794 0.022 0 0 1 0.021

Gene information

Forest plot

knitr::include_graphics("plots/SLC20A1_FOREST.png")

Funnel plot

knitr::include_graphics("plots/SLC20A1_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/SLC20A1_INFLUENCE.png")

XRCC1

Statistics of XRCC1 meta-analisys

kable(sig.genes.df['XRCC1',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
XRCC1 -0.089 -0.059 -0.029 0 0.452 0.929 0.015 0 0 1 0.021

Gene information

Forest plot

knitr::include_graphics("plots/XRCC1_FOREST.png")

Funnel plot

knitr::include_graphics("plots/XRCC1_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/XRCC1_INFLUENCE.png")

CABP1

Statistics of CABP1 meta-analisys

kable(sig.genes.df['CABP1',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
CABP1 -0.166 -0.11 -0.053 0 0.287 0.962 0.029 0 0 1 0.022

Gene information

Forest plot

knitr::include_graphics("plots/CABP1_FOREST.png")

Funnel plot

knitr::include_graphics("plots/CABP1_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/CABP1_INFLUENCE.png")

CGI-115

Statistics of CGI-115 meta-analisys

kable(sig.genes.df['CGI-115',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
CGI-115 0.032 0.067 0.101 0 0.241 0.887 0.018 0 0 1 0.022

Gene information

Forest plot

knitr::include_graphics("plots/CGI_115_FOREST.png")

Funnel plot

knitr::include_graphics("plots/CGI_115_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/CGI_115_INFLUENCE.png")

HIST2H2BE

Statistics of HIST2H2BE meta-analisys

kable(sig.genes.df['HIST2H2BE',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
HIST2H2BE 0.058 0.12 0.182 0 0.502 0.778 0.032 0 0 1 0.022

Gene information

Forest plot

knitr::include_graphics("plots/HIST2H2BE_FOREST.png")

Funnel plot

knitr::include_graphics("plots/HIST2H2BE_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/HIST2H2BE_INFLUENCE.png")

PHF16

Statistics of PHF16 meta-analisys

kable(sig.genes.df['PHF16',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
PHF16 0.036 0.074 0.112 0 0.292 0.864 0.019 0 0 1 0.022

Gene information

Forest plot

knitr::include_graphics("plots/PHF16_FOREST.png")

Funnel plot

knitr::include_graphics("plots/PHF16_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/PHF16_INFLUENCE.png")

PPME1

Statistics of PPME1 meta-analisys

kable(sig.genes.df['PPME1',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
PPME1 -0.096 -0.063 -0.03 0 1.02 0.796 0.017 0 0 1 0.024

Gene information

Forest plot

knitr::include_graphics("plots/PPME1_FOREST.png")

Funnel plot

knitr::include_graphics("plots/PPME1_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/PPME1_INFLUENCE.png")

SLC25A27

Statistics of SLC25A27 meta-analisys

kable(sig.genes.df['SLC25A27',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
SLC25A27 -0.18 -0.118 -0.057 0 1.252 0.741 0.031 0 0 1 0.024

Gene information

Forest plot

knitr::include_graphics("plots/SLC25A27_FOREST.png")

Funnel plot

knitr::include_graphics("plots/SLC25A27_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/SLC25A27_INFLUENCE.png")

AGPAT7

Statistics of AGPAT7 meta-analisys

kable(sig.genes.df['AGPAT7',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
AGPAT7 -0.15 -0.099 -0.047 0 0.33 0.848 0.026 0 0 1 0.025

Gene information

Forest plot

knitr::include_graphics("plots/AGPAT7_FOREST.png")

Funnel plot

knitr::include_graphics("plots/AGPAT7_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/AGPAT7_INFLUENCE.png")

IDH3A

Statistics of IDH3A meta-analisys

kable(sig.genes.df['IDH3A',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
IDH3A -0.106 -0.07 -0.033 0 0.902 0.825 0.019 0 0 1 0.025

Gene information

Forest plot

knitr::include_graphics("plots/IDH3A_FOREST.png")

Funnel plot

knitr::include_graphics("plots/IDH3A_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/IDH3A_INFLUENCE.png")

IDH3G

Statistics of IDH3G meta-analisys

kable(sig.genes.df['IDH3G',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
IDH3G -0.086 -0.057 -0.027 0 1.429 0.699 0.015 0 0 1 0.025

Gene information

Forest plot

knitr::include_graphics("plots/IDH3G_FOREST.png")

Funnel plot

knitr::include_graphics("plots/IDH3G_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/IDH3G_INFLUENCE.png")

NAG6

Statistics of NAG6 meta-analisys

kable(sig.genes.df['NAG6',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
NAG6 -0.104 -0.068 -0.033 0 1.431 0.489 0.018 0 0 1 0.025

Gene information

Forest plot

knitr::include_graphics("plots/NAG6_FOREST.png")

Funnel plot

knitr::include_graphics("plots/NAG6_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/NAG6_INFLUENCE.png")

OGDHL

Statistics of OGDHL meta-analisys

kable(sig.genes.df['OGDHL',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
OGDHL -0.113 -0.074 -0.035 0 0.247 0.884 0.02 0 0 1 0.025

Gene information

Forest plot

knitr::include_graphics("plots/OGDHL_FOREST.png")

Funnel plot

knitr::include_graphics("plots/OGDHL_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/OGDHL_INFLUENCE.png")

SC5DL

Statistics of SC5DL meta-analisys

kable(sig.genes.df['SC5DL',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
SC5DL -0.107 -0.071 -0.034 0 1.262 0.532 0.019 0 0 1 0.025

Gene information

Forest plot

knitr::include_graphics("plots/SC5DL_FOREST.png")

Funnel plot

knitr::include_graphics("plots/SC5DL_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/SC5DL_INFLUENCE.png")

SLC6A17

Statistics of SLC6A17 meta-analisys

kable(sig.genes.df['SLC6A17',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
SLC6A17 -0.133 -0.087 -0.041 0 1.66 0.646 0.023 0 0 1 0.026

Gene information

Forest plot

knitr::include_graphics("plots/SLC6A17_FOREST.png")

Funnel plot

knitr::include_graphics("plots/SLC6A17_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/SLC6A17_INFLUENCE.png")

C5orf21

Statistics of C5orf21 meta-analisys

kable(sig.genes.df['C5orf21',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
C5orf21 0.019 0.04 0.061 0 0.61 0.737 0.011 0 0 1 0.028

Gene information

Forest plot

knitr::include_graphics("plots/C5orf21_FOREST.png")

Funnel plot

knitr::include_graphics("plots/C5orf21_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/C5orf21_INFLUENCE.png")

CFDP1

Statistics of CFDP1 meta-analisys

kable(sig.genes.df['CFDP1',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
CFDP1 0.027 0.058 0.089 0 0.527 0.913 0.016 0 0 1 0.028

Gene information

Forest plot

knitr::include_graphics("plots/CFDP1_FOREST.png")

Funnel plot

knitr::include_graphics("plots/CFDP1_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/CFDP1_INFLUENCE.png")

DSCR1L1

Statistics of DSCR1L1 meta-analisys

kable(sig.genes.df['DSCR1L1',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
DSCR1L1 -0.115 -0.075 -0.035 0 1.488 0.475 0.02 0 0 1 0.028

Gene information

Forest plot

knitr::include_graphics("plots/DSCR1L1_FOREST.png")

Funnel plot

knitr::include_graphics("plots/DSCR1L1_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/DSCR1L1_INFLUENCE.png")

ZNF331

Statistics of ZNF331 meta-analisys

kable(sig.genes.df['ZNF331',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
ZNF331 -0.09 -0.059 -0.027 0 3.219 0.359 0.016 0 6.792 1.073 0.028

Gene information

Forest plot

knitr::include_graphics("plots/ZNF331_FOREST.png")

Funnel plot

knitr::include_graphics("plots/ZNF331_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/ZNF331_INFLUENCE.png")

NDUFB8

Statistics of NDUFB8 meta-analisys

kable(sig.genes.df['NDUFB8',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
NDUFB8 -0.041 -0.027 -0.012 0 1.765 0.623 0.007 0 0 1 0.03

Gene information

Forest plot

knitr::include_graphics("plots/NDUFB8_FOREST.png")

Funnel plot

knitr::include_graphics("plots/NDUFB8_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/NDUFB8_INFLUENCE.png")

PKNOX2

Statistics of PKNOX2 meta-analisys

kable(sig.genes.df['PKNOX2',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
PKNOX2 -0.092 -0.06 -0.028 0 1.465 0.69 0.016 0 0 1 0.03

Gene information

Forest plot

knitr::include_graphics("plots/PKNOX2_FOREST.png")

Funnel plot

knitr::include_graphics("plots/PKNOX2_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/PKNOX2_INFLUENCE.png")

PLXDC2

Statistics of PLXDC2 meta-analisys

kable(sig.genes.df['PLXDC2',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
PLXDC2 0.055 0.118 0.18 0 1.661 0.436 0.032 0 0 1 0.03

Gene information

Forest plot

knitr::include_graphics("plots/PLXDC2_FOREST.png")

Funnel plot

knitr::include_graphics("plots/PLXDC2_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/PLXDC2_INFLUENCE.png")

SCAMP5

Statistics of SCAMP5 meta-analisys

kable(sig.genes.df['SCAMP5',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
SCAMP5 -0.082 -0.053 -0.025 0 1.113 0.774 0.015 0 0 1 0.03

Gene information

Forest plot

knitr::include_graphics("plots/SCAMP5_FOREST.png")

Funnel plot

knitr::include_graphics("plots/SCAMP5_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/SCAMP5_INFLUENCE.png")

SLC25A29

Statistics of SLC25A29 meta-analisys

kable(sig.genes.df['SLC25A29',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
SLC25A29 0.041 0.089 0.136 0 1.234 0.539 0.024 0 0 1 0.03

Gene information

Forest plot

knitr::include_graphics("plots/SLC25A29_FOREST.png")

Funnel plot

knitr::include_graphics("plots/SLC25A29_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/SLC25A29_INFLUENCE.png")

C3orf39

Statistics of C3orf39 meta-analisys

kable(sig.genes.df['C3orf39',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
C3orf39 -0.093 -0.061 -0.028 0 0.11 0.946 0.017 0 0 1 0.031

Gene information

Forest plot

knitr::include_graphics("plots/C3orf39_FOREST.png")

Funnel plot

knitr::include_graphics("plots/C3orf39_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/C3orf39_INFLUENCE.png")

C5orf16

Statistics of C5orf16 meta-analisys

kable(sig.genes.df['C5orf16',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
C5orf16 -0.22 -0.143 -0.066 0 1.505 0.471 0.039 0 0 1 0.031

Gene information

Forest plot

knitr::include_graphics("plots/C5orf16_FOREST.png")

Funnel plot

knitr::include_graphics("plots/C5orf16_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/C5orf16_INFLUENCE.png")

CALR

Statistics of CALR meta-analisys

kable(sig.genes.df['CALR',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
CALR 0.031 0.068 0.104 0 1.006 0.8 0.019 0 0 1 0.031

Gene information

Forest plot

knitr::include_graphics("plots/CALR_FOREST.png")

Funnel plot

knitr::include_graphics("plots/CALR_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/CALR_INFLUENCE.png")

FAM51A1

Statistics of FAM51A1 meta-analisys

kable(sig.genes.df['FAM51A1',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
FAM51A1 0.026 0.057 0.089 0 1.942 0.379 0.016 0 0 1 0.031

Gene information

Forest plot

knitr::include_graphics("plots/FAM51A1_FOREST.png")

Funnel plot

knitr::include_graphics("plots/FAM51A1_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/FAM51A1_INFLUENCE.png")

MGC33692

Statistics of MGC33692 meta-analisys

kable(sig.genes.df['MGC33692',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
MGC33692 -0.079 -0.052 -0.024 0 0.059 0.971 0.014 0 0 1 0.031

Gene information

Forest plot

knitr::include_graphics("plots/MGC33692_FOREST.png")

Funnel plot

knitr::include_graphics("plots/MGC33692_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/MGC33692_INFLUENCE.png")

NAP1L5

Statistics of NAP1L5 meta-analisys

kable(sig.genes.df['NAP1L5',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
NAP1L5 -0.176 -0.114 -0.053 0 1.199 0.753 0.031 0 0 1 0.031

Gene information

Forest plot

knitr::include_graphics("plots/NAP1L5_FOREST.png")

Funnel plot

knitr::include_graphics("plots/NAP1L5_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/NAP1L5_INFLUENCE.png")

DHDDS

Statistics of DHDDS meta-analisys

kable(sig.genes.df['DHDDS',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
DHDDS -0.092 -0.059 -0.027 0 1.654 0.647 0.016 0 0 1 0.032

Gene information

Forest plot

knitr::include_graphics("plots/DHDDS_FOREST.png")

Funnel plot

knitr::include_graphics("plots/DHDDS_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/DHDDS_INFLUENCE.png")

FLJ22318

Statistics of FLJ22318 meta-analisys

kable(sig.genes.df['FLJ22318',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
FLJ22318 -0.097 -0.063 -0.029 0 2.651 0.266 0.017 0 24.566 1.326 0.032

Gene information

Forest plot

knitr::include_graphics("plots/FLJ22318_FOREST.png")

Funnel plot

knitr::include_graphics("plots/FLJ22318_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/FLJ22318_INFLUENCE.png")

GALE

Statistics of GALE meta-analisys

kable(sig.genes.df['GALE',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
GALE -0.077 -0.05 -0.023 0 1.647 0.649 0.014 0 0 1 0.032

Gene information

Forest plot

knitr::include_graphics("plots/GALE_FOREST.png")

Funnel plot

knitr::include_graphics("plots/GALE_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/GALE_INFLUENCE.png")

HIST1H2BD

Statistics of HIST1H2BD meta-analisys

kable(sig.genes.df['HIST1H2BD',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
HIST1H2BD 0.032 0.069 0.107 0 0.91 0.634 0.019 0 0 1 0.032

Gene information

Forest plot

knitr::include_graphics("plots/HIST1H2BD_FOREST.png")

Funnel plot

knitr::include_graphics("plots/HIST1H2BD_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/HIST1H2BD_INFLUENCE.png")

SENP2

Statistics of SENP2 meta-analisys

kable(sig.genes.df['SENP2',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
SENP2 -0.074 -0.048 -0.022 0 0.552 0.907 0.013 0 0 1 0.032

Gene information

Forest plot

knitr::include_graphics("plots/SENP2_FOREST.png")

Funnel plot

knitr::include_graphics("plots/SENP2_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/SENP2_INFLUENCE.png")

CPLX2

Statistics of CPLX2 meta-analisys

kable(sig.genes.df['CPLX2',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
CPLX2 -0.207 -0.134 -0.061 0 0.509 0.917 0.037 0 0 1 0.033

Gene information

Forest plot

knitr::include_graphics("plots/CPLX2_FOREST.png")

Funnel plot

knitr::include_graphics("plots/CPLX2_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/CPLX2_INFLUENCE.png")

CTBP1

Statistics of CTBP1 meta-analisys

kable(sig.genes.df['CTBP1',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
CTBP1 -0.072 -0.047 -0.021 0 2.751 0.432 0.013 0 0 1 0.033

Gene information

Forest plot

knitr::include_graphics("plots/CTBP1_FOREST.png")

Funnel plot

knitr::include_graphics("plots/CTBP1_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/CTBP1_INFLUENCE.png")

CYP2E1

Statistics of CYP2E1 meta-analisys

kable(sig.genes.df['CYP2E1',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
CYP2E1 -0.184 -0.119 -0.054 0 0.179 0.981 0.033 0 0 1 0.033

Gene information

Forest plot

knitr::include_graphics("plots/CYP2E1_FOREST.png")

Funnel plot

knitr::include_graphics("plots/CYP2E1_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/CYP2E1_INFLUENCE.png")

ENTPD6

Statistics of ENTPD6 meta-analisys

kable(sig.genes.df['ENTPD6',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
ENTPD6 -0.105 -0.068 -0.031 0 0.179 0.981 0.019 0 0 1 0.033

Gene information

Forest plot

knitr::include_graphics("plots/ENTPD6_FOREST.png")

Funnel plot

knitr::include_graphics("plots/ENTPD6_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/ENTPD6_INFLUENCE.png")

PSMD2

Statistics of PSMD2 meta-analisys

kable(sig.genes.df['PSMD2',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
PSMD2 -0.06 -0.039 -0.018 0 0.849 0.838 0.011 0 0 1 0.033

Gene information

Forest plot

knitr::include_graphics("plots/PSMD2_FOREST.png")

Funnel plot

knitr::include_graphics("plots/PSMD2_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/PSMD2_INFLUENCE.png")

WDR40A

Statistics of WDR40A meta-analisys

kable(sig.genes.df['WDR40A',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
WDR40A 0.029 0.065 0.101 0 0.649 0.723 0.018 0 0 1 0.034

Gene information

Forest plot

knitr::include_graphics("plots/WDR40A_FOREST.png")

Funnel plot

knitr::include_graphics("plots/WDR40A_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/WDR40A_INFLUENCE.png")

CAMK2G

Statistics of CAMK2G meta-analisys

kable(sig.genes.df['CAMK2G',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
CAMK2G -0.117 -0.076 -0.034 0 1.513 0.469 0.021 0 0 1 0.035

Gene information

Forest plot

knitr::include_graphics("plots/CAMK2G_FOREST.png")

Funnel plot

knitr::include_graphics("plots/CAMK2G_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/CAMK2G_INFLUENCE.png")

CCBL2

Statistics of CCBL2 meta-analisys

kable(sig.genes.df['CCBL2',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
CCBL2 -0.228 -0.147 -0.066 0 1.418 0.492 0.041 0 0 1 0.035

Gene information

Forest plot

knitr::include_graphics("plots/CCBL2_FOREST.png")

Funnel plot

knitr::include_graphics("plots/CCBL2_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/CCBL2_INFLUENCE.png")

PREX1

Statistics of PREX1 meta-analisys

kable(sig.genes.df['PREX1',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
PREX1 0.043 0.095 0.148 0 0.85 0.838 0.027 0 0 1 0.035

Gene information

Forest plot

knitr::include_graphics("plots/PREX1_FOREST.png")

Funnel plot

knitr::include_graphics("plots/PREX1_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/PREX1_INFLUENCE.png")

ANKRD32

Statistics of ANKRD32 meta-analisys

kable(sig.genes.df['ANKRD32',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
ANKRD32 0.061 0.136 0.212 0 0.35 0.84 0.039 0 0 1 0.039

Gene information

Forest plot

knitr::include_graphics("plots/ANKRD32_FOREST.png")

Funnel plot

knitr::include_graphics("plots/ANKRD32_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/ANKRD32_INFLUENCE.png")

SLC25A3

Statistics of SLC25A3 meta-analisys

kable(sig.genes.df['SLC25A3',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
SLC25A3 -0.051 -0.033 -0.015 0 0.357 0.949 0.009 0 0 1 0.039

Gene information

Forest plot

knitr::include_graphics("plots/SLC25A3_FOREST.png")

Funnel plot

knitr::include_graphics("plots/SLC25A3_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/SLC25A3_INFLUENCE.png")

C9orf45

Statistics of C9orf45 meta-analisys

kable(sig.genes.df['C9orf45',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
C9orf45 -0.113 -0.072 -0.032 0 0.336 0.845 0.021 0 0 1 0.04

Gene information

Forest plot

knitr::include_graphics("plots/C9orf45_FOREST.png")

Funnel plot

knitr::include_graphics("plots/C9orf45_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/C9orf45_INFLUENCE.png")

AHI1

Statistics of AHI1 meta-analisys

kable(sig.genes.df['AHI1',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
AHI1 -0.113 -0.073 -0.032 0 0.079 0.961 0.021 0 0 1 0.041

Gene information

Forest plot

knitr::include_graphics("plots/AHI1_FOREST.png")

Funnel plot

knitr::include_graphics("plots/AHI1_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/AHI1_INFLUENCE.png")

PNMA6A

Statistics of PNMA6A meta-analisys

kable(sig.genes.df['PNMA6A',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
PNMA6A -0.104 -0.066 -0.029 0 2.525 0.471 0.019 0 0 1 0.041

Gene information

Forest plot

knitr::include_graphics("plots/PNMA6A_FOREST.png")

Funnel plot

knitr::include_graphics("plots/PNMA6A_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/PNMA6A_INFLUENCE.png")

CCT4

Statistics of CCT4 meta-analisys

kable(sig.genes.df['CCT4',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
CCT4 0.02 0.045 0.071 0.001 1.129 0.77 0.013 0 0 1 0.045

Gene information

Forest plot

knitr::include_graphics("plots/CCT4_FOREST.png")

Funnel plot

knitr::include_graphics("plots/CCT4_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/CCT4_INFLUENCE.png")

ETS2

Statistics of ETS2 meta-analisys

kable(sig.genes.df['ETS2',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
ETS2 -0.152 -0.097 -0.042 0.001 0.227 0.973 0.028 0 0 1 0.045

Gene information

Forest plot

knitr::include_graphics("plots/ETS2_FOREST.png")

Funnel plot

knitr::include_graphics("plots/ETS2_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/ETS2_INFLUENCE.png")

HEBP1

Statistics of HEBP1 meta-analisys

kable(sig.genes.df['HEBP1',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
HEBP1 0.023 0.052 0.082 0.001 2.714 0.257 0.015 0 26.311 1.357 0.045

Gene information

Forest plot

knitr::include_graphics("plots/HEBP1_FOREST.png")

Funnel plot

knitr::include_graphics("plots/HEBP1_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/HEBP1_INFLUENCE.png")

HIST1H2BK

Statistics of HIST1H2BK meta-analisys

kable(sig.genes.df['HIST1H2BK',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
HIST1H2BK 0.045 0.104 0.163 0.001 1.103 0.576 0.03 0 0 1 0.045

Gene information

Forest plot

knitr::include_graphics("plots/HIST1H2BK_FOREST.png")

Funnel plot

knitr::include_graphics("plots/HIST1H2BK_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/HIST1H2BK_INFLUENCE.png")

NPAS3

Statistics of NPAS3 meta-analisys

kable(sig.genes.df['NPAS3',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
NPAS3 0.04 0.093 0.145 0.001 1.353 0.508 0.027 0 0 1 0.045

Gene information

Forest plot

knitr::include_graphics("plots/NPAS3_FOREST.png")

Funnel plot

knitr::include_graphics("plots/NPAS3_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/NPAS3_INFLUENCE.png")

PIGV

Statistics of PIGV meta-analisys

kable(sig.genes.df['PIGV',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
PIGV 0.026 0.06 0.094 0.001 2.134 0.344 0.017 0 6.279 1.067 0.045

Gene information

Forest plot

knitr::include_graphics("plots/PIGV_FOREST.png")

Funnel plot

knitr::include_graphics("plots/PIGV_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/PIGV_INFLUENCE.png")

SOX4

Statistics of SOX4 meta-analisys

kable(sig.genes.df['SOX4',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
SOX4 0.037 0.085 0.134 0.001 0.207 0.976 0.025 0 0 1 0.045

Gene information

Forest plot

knitr::include_graphics("plots/SOX4_FOREST.png")

Funnel plot

knitr::include_graphics("plots/SOX4_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/SOX4_INFLUENCE.png")

TARBP1

Statistics of TARBP1 meta-analisys

kable(sig.genes.df['TARBP1',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
TARBP1 -0.156 -0.1 -0.043 0.001 0.354 0.95 0.029 0 0 1 0.045

Gene information

Forest plot

knitr::include_graphics("plots/TARBP1_FOREST.png")

Funnel plot

knitr::include_graphics("plots/TARBP1_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/TARBP1_INFLUENCE.png")

AARSD1

Statistics of AARSD1 meta-analisys

kable(sig.genes.df['AARSD1',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
AARSD1 -0.066 -0.042 -0.018 0.001 1.44 0.487 0.012 0 0 1 0.046

Gene information

Forest plot

knitr::include_graphics("plots/AARSD1_FOREST.png")

Funnel plot

knitr::include_graphics("plots/AARSD1_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/AARSD1_INFLUENCE.png")

GANAB

Statistics of GANAB meta-analisys

kable(sig.genes.df['GANAB',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
GANAB 0.029 0.067 0.105 0.001 0.47 0.926 0.019 0 0 1 0.046

Gene information

Forest plot

knitr::include_graphics("plots/GANAB_FOREST.png")

Funnel plot

knitr::include_graphics("plots/GANAB_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/GANAB_INFLUENCE.png")

PSMF1

Statistics of PSMF1 meta-analisys

kable(sig.genes.df['PSMF1',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
PSMF1 0.02 0.047 0.074 0.001 1.75 0.417 0.014 0 0 1 0.046

Gene information

Forest plot

knitr::include_graphics("plots/PSMF1_FOREST.png")

Funnel plot

knitr::include_graphics("plots/PSMF1_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/PSMF1_INFLUENCE.png")

DPP8

Statistics of DPP8 meta-analisys

kable(sig.genes.df['DPP8',1:11])
lower_bound logFC upper_bound pvalue QE QEp SE tau2 I2 H2 p.adjust.fdr
DPP8 -0.093 -0.059 -0.026 0.001 2.161 0.339 0.017 0 7.455 1.081 0.048

Gene information

Forest plot

knitr::include_graphics("plots/DPP8_FOREST.png")

Funnel plot

knitr::include_graphics("plots/DPP8_FUNNEL.png")

Incluence plot

knitr::include_graphics("plots/DPP8_INFLUENCE.png")

sessionInfo

date()
## [1] "Wed Apr 17 20:36:27 2024"
sessionInfo()
## R version 4.3.2 (2023-10-31 ucrt)
## Platform: x86_64-w64-mingw32/x64 (64-bit)
## Running under: Windows 11 x64 (build 22631)
## 
## Matrix products: default
## 
## 
## locale:
## [1] LC_COLLATE=Spanish_Spain.utf8  LC_CTYPE=Spanish_Spain.utf8    LC_MONETARY=Spanish_Spain.utf8
## [4] LC_NUMERIC=C                   LC_TIME=Spanish_Spain.utf8    
## 
## time zone: Europe/Madrid
## tzcode source: internal
## 
## attached base packages:
## [1] stats     graphics  grDevices utils     datasets  methods   base     
## 
## other attached packages:
##  [1] knitr_1.45          dplyr_1.1.4         limma_3.56.2        stringr_1.5.1       metafor_4.4-0      
##  [6] numDeriv_2016.8-1.1 metadat_1.2-0       Matrix_1.6-5        Biobase_2.60.0      BiocGenerics_0.48.1
## 
## loaded via a namespace (and not attached):
##  [1] DBI_1.2.2                   bitops_1.0-7                rlang_1.1.3                
##  [4] magrittr_2.0.3              matrixStats_1.2.0           compiler_4.3.2             
##  [7] RSQLite_2.3.5               DelayedMatrixStats_1.24.0   png_0.1-8                  
## [10] vctrs_0.6.5                 reshape2_1.4.4              pkgconfig_2.0.3            
## [13] crayon_1.5.2                fastmap_1.1.1               XVector_0.40.0             
## [16] utf8_1.2.4                  rmarkdown_2.25              bit_4.0.5                  
## [19] xfun_0.42                   zlibbioc_1.46.0             cachem_1.0.8               
## [22] beachmat_2.18.0             jsonlite_1.8.8              GenomeInfoDb_1.38.2        
## [25] blob_1.2.4                  highr_0.10                  DelayedArray_0.28.0        
## [28] BiocParallel_1.36.0         irlba_2.3.5.1               parallel_4.3.2             
## [31] R6_2.5.1                    bslib_0.6.1                 stringi_1.8.3              
## [34] RColorBrewer_1.1-3          jquerylib_0.1.4             GenomicRanges_1.54.1       
## [37] Rcpp_1.0.12                 SummarizedExperiment_1.32.0 IRanges_2.34.1             
## [40] tidyselect_1.2.0            yaml_2.3.8                  rstudioapi_0.15.0          
## [43] abind_1.4-5                 codetools_0.2-19            lattice_0.21-9             
## [46] tibble_3.2.1                plyr_1.8.9                  KEGGREST_1.42.0            
## [49] evaluate_0.23               Biostrings_2.68.1           pillar_1.9.0               
## [52] MatrixGenerics_1.14.0       DT_0.32                     stats4_4.3.2               
## [55] generics_0.1.3              mathjaxr_1.6-0              RCurl_1.98-1.14            
## [58] S4Vectors_0.38.2            ggplot2_3.4.4               sparseMatrixStats_1.14.0   
## [61] munsell_0.5.0               scales_1.3.0                xtable_1.8-4               
## [64] glue_1.7.0                  tools_4.3.2                 ScaledMatrix_1.10.0        
## [67] annotate_1.80.0             locfit_1.5-9.8              XML_3.99-0.16.1            
## [70] cowplot_1.1.3               grid_4.3.2                  AnnotationDbi_1.64.1       
## [73] edgeR_4.0.1                 colorspace_2.1-0            nlme_3.1-164               
## [76] GenomeInfoDbData_1.2.11     BiocSingular_1.18.0         cli_3.6.1                  
## [79] rsvd_1.0.5                  fansi_1.0.6                 S4Arrays_1.2.0             
## [82] ggdendro_0.1.23             gtable_0.3.4                sass_0.4.8                 
## [85] DESeq2_1.42.0               digest_0.6.34               SparseArray_1.2.1          
## [88] ggrepel_0.9.5               dqrng_0.3.2                 geneplotter_1.80.0         
## [91] htmlwidgets_1.6.4           memoise_2.0.1               htmltools_0.5.7            
## [94] lifecycle_1.0.4             httr_1.4.7                  PCAtools_2.14.0            
## [97] bit64_4.0.5                 MASS_7.3-60